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COMPUTATIONAL BIOPHYSICS

UNIVERSITY OF TWENTE
THE NETHERLANDS
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2007 2006 2005 2004 2003 2002 2001 2000 < 2000

Publications 2006

S.A. Shkulipa, W.K. den Otter and W.J. Briels
Simulations of the dynamics of thermal undulations in lipid bilayers in the tension-less state and under stress
J. Chem. Phys. 125, 234905 (21 December 2006)

J.P. Hoogenboom, W.K. den Otter and H.L. Offerhaus
Accurate and unbiased estimation of power-law exponents from single-emitter blinking data
J. Chem. Phys. 125, 204713 (28 November 2006)

S. A. Shkulipa
Computer simulations of lipid bilayer dynamics
Thesis, University of Twente (22 November 2006)

J.T. Padding and A.A. Louis
Hydrodynamic interactions and Brownian forces in colloidal suspensions: coarse-graining over time and length scales
Phys. Rev. E. 74, 031402 (September 2006)

Y.G. Tao, W.K. den Otter and W.J. Briels
Shear viscosities and normal stress differences of rigid liquid-crystalline polymers
Macromolecules 39, 5939 (22 August 2006)

P. M. Jager
Effects of stiffness and polydispersity on the phase behaviour of block copolymers
Thesis, University of Twente (14 July 2006)

Y.G. Tao, W.K. den Otter and W.J. Briels
Periodic orientational motions of rigid liquid-crystalline polymers in shear flow
J. Chem. Phys. 124, 204902 (28 May 2006)

Y.-G. Tao
Kayaking and wagging of rigid rod-like colloids in shear flow
Thesis, University of Twente (12 May 2006)

S.A. Shkulipa, W.K. den Otter and W.J. Briels
Thermal undulations of lipid bilayers relax by intermonolayer friction at sub-micrometer length scales
Phys. Rev. Lett. 96, 178302 (5 May 2006)

J. Wohlert, W.K. den Otter, O. Edholm and W.J. Briels
Free energy of a trans-membrane pore calculated from atomistic molecular dynamics simulations
J. Chem. Phys. 124, 154905 (21 April 2006)

Y.G. Tao, W.K. den Otter, J.K.G. Dhont and W.J. Briels
Isotropic-nematic spinodals of rigid long thin rodlike colloids by event-driven Brownian dynamics simulations
J. Chem. Phys. 124, 134906 (7 April 2006)

J.K.G. Dhont and W.J. Briels
Rod-like Brownian particles in shear flow
in Soft Matter: Complex Colloidal Suspensions, Volume 2, edited by G. Gompper and M. Schick, Chapter 3 (Wiley-VCH, 2006)

Presentations 2006

A. van den Noort
Progress in resin rheology.
Arnhem, 16 maart 2006.

W.J. Briels
Brownian dynamics simulations of kayaking and wagging colloidal rods.
Jülich, 3-5 April 2006.

J.T. Padding
Mesoscopic simulations of the rheology of entangled wormlike micelles.
Juelich, 5-7 April 2006.

J.T. Padding
Colloidal hydrodynamics: coarse-graining across time and length scales with a particle based method.
Juelich, 5-7 April 2006.

W.J. Briels
Brownian dynamics simulations of Kayaking and wagging colloidal rods.
Crete, 27-29 April 2006.

W.J. Briels
Simulations of shear banding in paints.
Venetie, 2-5 May 2006.

W.J. Briels
Simulations of the influence of DMSO on the thermal properties of ceramides.
Venetie, 2-5 May 2006.

J.T. Padding
Particle tracking microrheology in cells-simulations.
Enschede, 6 juni 2006.

W.J. Briels
Simulations of shear banding in paints.
Rhodos, 3-7 September 2006.

W.J. Briels
From bio-membranes to mop-heads.
Leiden, 15 September 2006.

A. van den Noort
Shear thinning and banding in resin systems.
Arnhem, 28 september 2006.

W.J. Briels
Simulations of shear banding in paints.
Cambridge, 2-3 November 2006.

Poster Presentations 2006

J.T. Padding and A.A. Louis
Hydrodynamic and Brownian fluctuations in sedimenting suspensions.
Jülich, 5-7 April 2006.

A. van den Noort and W.J. Briels
Mesoscopic simulations of resin rheology using responsive particle dynamics.
Creta, 26-29 April 2006.

R. Notman, W. den Otter, M. Noro, W. Briels and J. Anwar
Molecular simulations of skin lipids with DMSO: insights into penetration enhancer activity
Britisch Pharmaceutical Conference, Manchester, 4-6 September 2006.

A.K. Thakre
MD simulations of phase separation in binary liquids.
Bradford, 4-6 September 2006.

J.T. Padding and A.A. Louis
Hydrodynamic and Brownian fluctuations in sedimenting suspensions.
Utrecht, 11 October 2006.

A. van den Noort and W.J. Briels
Mesoscopic simulations of resin rheology using responsive particle dynamics.
Bonn, 14-17 November 2006.

A.K. Thakre and W.J. Briels
MD simulation of phase separation in binary liquids.
Bonn, 14-17 November 2006.

S.A. Shkulipa and W.J. Briels
Simulations of thermal undulations of bilayers.
Bonn, 14-17 November 2006.

P. Kindt and W.J. Briels
Scaling in polymer melt simulations.
Bonn, 14-17 November 2006.