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COMPUTATIONAL BIOPHYSICS

UNIVERSITY OF TWENTE
THE NETHERLANDS
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2007 2006 2005 2004 2003 2002 2001 2000 < 2000

Publications 2008

Simulation of granular mixing and segregation in a horizontal rotating drum: impact of rotational speed and fill level
M.M.H.D. Arntz, W.K. den Otter, W.J. Briels, P.J.T. Bussmann, H.H. Beeftink and R.M. Boom
AIChE J. 54, 3133 (December 2008)

Study of the thermal diffusion behaviour of simple binary mixtures
P. Polyakov
Thesis, University of Twente (November 2008)

Simulations of skin barrier function: free energies of hydrophobic and hydrophilic transmembrane pores in ceramide bilayers
R. Notman, J. Anwar, W.J. Briels, M.G. Noro and W.K. den Otter
Biophys. J. 95, 4763 (November 2008)

Simulation of phase separation in quiescent and sheared liquids
A.K. Thakre
Thesis, University of Twente (September 2008)

this_paper.pdf Dynamics and rheology of wormlike micelles emerging from particulate computer simulations
J.T. Padding, E.S. Boek and W.J. Briels
J. Chem. Phys. 192, 074903 (August 2008)

this_paper.pdf Spinodal decomposition of asymmetric binary fluids in a micro-Couette geometry simulated with molecular dynamics
A.K. Thakre, W.K. den Otter, J.T. Padding and W.J. Briels
J. Chem. Phys. 129, 074505 (August 2008)

Colloidal asphaltene deposition and aggregation in capillary flow: experiments and mesoscopic simulation
E.S. Boek, H.K. Ladva, J.P. Crawshaw and J.T. Padding
AIP Conf. Proc. 1027, 273 (July 2008)

this_paper.pdf Finite system size effects in the interfacial dynamics of binary liquid films
A.K. Thakre, J.T. Padding, W.K. den Otter and W.J. Briels
J. Chem. Phys. 129 044701 (July 2008)

Brownian dynamics simulations of concentration coupled shear banding
A. van den Noort and W.J. Briels
J. Non-Newt. Fluid Mech. 152, 148-155 (June 2008)

Influence of system size and solvent flow on the distribution of wormlike micelles in a contraction-expansion geometry
M.R. Stukan, E.S. Boek, J.T. Padding and J.P. Crawshaw
Eur. Phys. J. E 26, 63 (May 2008).

Gradient and vorticity banding
J.K.G. Dhont and W.J. Briels
Rheol. Acta 47, 257-281 (April 2008)

this_paper.pdf Molecular dynamics simulation of phase separating binary liquids in cylindrical Couette flow
A.K. Thakre, J.T. Padding, W.K. den Otter and W.J. Briels
J. Chem. Phys. 128, 154707 (April 2008)

Deposition of colloidal asphaltene in capillary flow: experiments and mesoscopic simulation
E.S. Boek, H.K. Ladva, J.P. Crawshaw and J.T. Padding
Energy & Fuels 22, 805-813 (March 2008).

this_paper.pdf The role of entanglements on the stability of microphase separated diblock copolymers in shear flow
P. Kindt and W.J. Briels
J. Chem. Phys. 128, 124901 (March 2008)

Flow of wormlike micelles in an expansion-contraction geometry
M.R. Stukan, E.S. Boek, J.T. Padding, W.J. Briels and J.P. Crawshaw
Soft Matter 4, 870-879 (February 2008)

Single-particle thermal diffusion of charged colloids: Double-layer theory in a temperature gradient
J.K.G. Dhont and W.J. Briels
Eur. Phys. J. E 4, 61-76 (January 2008)

Interplay between hydrodynamic and Brownian fluctuations in sedimenting colloidal suspensions
J.T. Padding and A.A. Louis
Phys. Rev. E 77, 011402 (January 2008)

Domain formation and growth in spinodal decomposition of a binary fluid by molecular dynamics simulations
A.K. Thakre, W.K. den Otter and W.J. Briels
Phys. Rev. E 77, 011503 (January 2008)

Presentations 2008

Modulating the skin barrier function by DMSO: MD simulations on the free energies of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter
London, 9 September 2008

Modulating the skin barrier function by DMSO: molecular dynamics simulations of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter
Maastricht, 27 August 2008

Simulations of the dynamics and rheology of wormlike micelles
J.T. Padding
Monterey (USA), 3-8 August 2008

Coarse Graining in Molecular Simulations
W.J. Briels
Patras, 20 June 2008

Single-particle thermal diffusion of charged colloids: double-layer theory in a temperature gradient
W.J. Briels
Bonn, 2 June 2008

Simulations of lipid membranes: dynamics and pores
W.K. den Otter
Amsterdam, 23 May 2008

Molecular dynamics simulations of the skin barrier function: hydrophobic trans-membrane pores and DMSO
W.K. den Otter
Riva del Garda, 6 May 2008

Do hydrophobic trans-membrane pores hold water? Molecular dynamics simulations of the skin barrier function.
W.K. den Otter
Les Houches, 7 April 2008

Mesoscopic simulations of soft matter
W.J. Briels
Crete, 14 March 2008

Transient forces in simulations of soft matter
W.J. Briels
Lunteren, 12 February 2008

Statistical physics, coarse graining and stochastic simulations
W.J. Briels
Han-sur-Lesse, 28 January - 1 February 2008

From atoms to macromolecules: changing concepts of force
W.J. Briels
Lunteren, 28 January 2008

Transient forces in particle based simulations of soft matter rheology
W.J. Briels
Oxford, 9 January 2008

Poster presentations 2008

Modulating the skin barrier function by DMSO: molecular dynamics simulations of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter, R. Notman and W.J. Briels
Veldhoven, 8-10 December 2008

Modulating the skin barrier function by DMSO: molecular dynamics simulations of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter, R. Notman and W.J. Briels
Enschede, 20 November 2008

Dynamics and rheology of wormlike micelles emerging from particulate computer simulations
J.T. Padding, E.S. Boek and W.J. Briels
Enschede, 20 November 2008

Modulating the skin barrier function by DMSO: molecular dynamics simulations of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter, R. Notman and W.J. Briels
Bonn, 11-14 November 2008

Dynamics and rheology of wormlike micelles emerging from particulate computer simulations
J.T. Padding, E.S. Boek and W.J. Briels
Bonn, 11-14 November 2008

Modulating the skin barrier function by DMSO: molecular dynamics simulations of hydrophilic and hydrophobic transmembrane pores
W.K. den Otter, R. Notman and W.J. Briels
Veldhoven, 29 September 2008

Mesoscopic simulations of resin rheology using responsive particle dynamics.
A. van den Noort and W.J. Briels
Konstanz, 2-5 April 2008

Hydrodynamic and Brownian fluctuations in sedimenting suspensions
J.T. Padding and A.A. Louis
Lunteren, 11-12 February 2008

Enhancement of permeability and pore formation in ceramide bilayers by DMSO
W.K. den Otter
Veldhoven, 21-22 January 2008

Hydrodynamic and Brownian fluctuations in sedimenting suspensions
J.T. Padding and A.A. Louis
Veldhoven, 21-22 January 2008